San Francisco Bay Area, California

Applied mathematician and scientific programmer.

Template for JAX projects using Cookiecutter

Library for experimentation with manifold learning methods

Simple interface between Common Lisp and Maxima

Notes written while working my way through the source code of the SBCL compiler

Tool for printing call graphs

Buchberger's algorithm in Common Lisp

Source code accompanying paper on gentlest ascent dynamics on manifolds defined by point-clouds

Use Gaussian processes as collective variables in molecular simulations with NAMD

Convert decks of flashcards written in LaTeX to Anki

Numerical experiments for optimizing free energy perturbation paths via thermodynamic geometry

Boilerplate generator for Common Lisp projects

Simple Maple command-line interface for Emacs

REGEX-TRACE is a Common Lisp macro that TRACEs functions that match a given regular expression

Milestoning tool

Solver for the committor equation using the finite element method. Uses FEniCS and a potential of mean force obtained by colvars.